CDS

Accession Number TCMCG006C43531
gbkey CDS
Protein Id XP_013740333.1
Location join(222178..222190,222480..222550,222647..222988,223074..223157,223227..223279,223348..223545,223622..223759,223837..223876)
Gene LOC106443308
GeneID 106443308
Organism Brassica napus

Protein

Length 312aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA293435
db_source XM_013884879.2
Definition histone deacetylase HDT3-like [Brassica napus]

EGGNOG-MAPPER Annotation

COG_category S
Description rRNA processing
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko03009        [VIEW IN KEGG]
ko03036        [VIEW IN KEGG]
KEGG_ko ko:K11294        [VIEW IN KEGG]
EC -
KEGG_Pathway ko05130        [VIEW IN KEGG]
map05130        [VIEW IN KEGG]
GOs GO:0001651        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005730        [VIEW IN EMBL-EBI]
GO:0005732        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006364        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016072        [VIEW IN EMBL-EBI]
GO:0022613        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0034470        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034660        [VIEW IN EMBL-EBI]
GO:0042254        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0044085        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044452        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1990904        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGAGTTTTGGGGAGCTAAAGTTAAGGCCGGCAAGACTCTCAAGGTGAAGCCTGATGAAGACTGTCTTATTCACATTTCTCAGGCTTCTCTTCGTAAATCGAGAAGGGGAGTATCTGCCCTCTTGTATGCCACCGTTGATGACAAGAAACTCCTCCTTGGAACACTCTCTCAAGACATCAGCTTTGACCATCTCCTCTTTGACAGAGAATTCGAGCTCTCACACACCTTGGAGAGAGGATCTGTCCATTTCACTGGATACAAATCCAAAGTTTCCACAAAGTCCAAGCCTGCTTCAGATGATGATGATGAGGAGGCGTTTGTAGAGATGGTCTGCTCTGCAAAACAAATTAAGGATTTAATGTATCCTAGTGATCCAGATGATCTCTTACTAACAAAACAGGATCTAGAGAATTTGGTGCCAGAGAAATCTACAAAGGTTCTAACGACAGCTCACTCTTATCCTCGCGAGGATCCCGACTTAACAGATTCAGATGAGGATTTTCTTTCGCCCACACTTCTGATTATGAGTAATATCGACATGGATTCTACCAAAGCTGACATTACAAATTTCTTCAAAGATAATTGCAGCTTGCAAGTTCGTATTGTTCAGCTAGTATCGACGGTGGATGAGGAGAGCAAGAAGACGAAGCTTGAAGCTCATATCGAGTTCCGGTCTAATCAAGAATTAAAACTTGCGAGAAAACTGAATGGTCATCTAATGGGGAAGTCTCGTATTTTCTTTGATAGAACACTTGGCAGCTTACATGTGTTTTTCATCTCTGGATTCAACCGTGATTTGCGTGAAGATGATCTTAAGCGACAAATAGAGAAAAAGTTTAAAACATGTGGAGCACTGAAGAAGATAATTTTGCCTAAAGAGCAAGAAAATTTGCTAGGGTTTGGTTACATAACACAACATCTGAAGAAACGGTGCTAA
Protein:  
MEFWGAKVKAGKTLKVKPDEDCLIHISQASLRKSRRGVSALLYATVDDKKLLLGTLSQDISFDHLLFDREFELSHTLERGSVHFTGYKSKVSTKSKPASDDDDEEAFVEMVCSAKQIKDLMYPSDPDDLLLTKQDLENLVPEKSTKVLTTAHSYPREDPDLTDSDEDFLSPTLLIMSNIDMDSTKADITNFFKDNCSLQVRIVQLVSTVDEESKKTKLEAHIEFRSNQELKLARKLNGHLMGKSRIFFDRTLGSLHVFFISGFNRDLREDDLKRQIEKKFKTCGALKKIILPKEQENLLGFGYITQHLKKRC